Cytoscape.org Cytoscape: An Open Source Platform for Complex Network Analysis and Visualization

Cytoscape Official Web Site

Cytoscape.org Overview

out of 100, suggesting there are improvements to be made.

Cytoscape.org is a website dedicated to the promotion and distribution of an open-source platform for complex network analysis and visualization. The site aims to provide easy access to a set of powerful tools for designing, visualizing, and analyzing networks at various levels of complexity.

The website has a very clear and intuitive structure, with a simple but effective navigation system. The homepage features a banner with the software's name and a clear call to action to download, with large buttons prominently displayed.

Below the banner, there are brief summaries of the software's different functionalities. Additionally, there are links to documentation, tutorials, and community resources. The site also has an active community section with a forum and user support for troubleshooting and discussing the software.

The website offers several resources for users to learn and engage with Cytoscape. There is a dedicated section with several video tutorials, case studies, and webinars. The tutorials cover various aspects of the software, including how to install, visualize, analyze, and export networks. The case studies demonstrate how users can apply the software in different fields, such as molecular biology, systems biology, and drug development.

There is also an active developer section of the site, which is aimed at developers who want to get involved with the development of the Cytoscape platform. This section has links to the source code, guidelines for contributors, and information about the software's plugins architecture.

The website is family-friendly, with no adult content, violence, or explicit language that could offend or harm any users.

Cytoscape.org is hosted by FASTLY, a US hosting provider. The site uses Let's Encrypt SSL, ensuring secure communication between the server and clients. PageSpeed Insights scores rate the site's speed as average, with a score of 55 out of 100. It means that there is room for improvement in terms of optimization concerning the speed of the page.

Overall, Cytoscape.org is a well-organized website that offers complete documentation and resources for its users. The simplicity of the site's layout and navigation combined with the extensive documentation makes it easy for any user to download, learn, and use the platform. The website is safe and welcoming and provides an educational experience for any user interested in network analysis and visualization.

Cytoscape.org Rank Summary

Global Rank

116,000

Average Load Time

1.51sec

Links In Count

861

Website Value

$102,302

Audience Geography. Where are cytoscape.org visitors located?

Country	Visitors
United States US	18.9%
India IN	9.2%
United Kingdom GB	5.6%
Iran IR	3.8%
Pakistan PK	1.6%
Greece GR	1.5%
Algeria DZ	0.8%
Other	58.5%

Country	Pageviews
United States US	17.2%
India IN	11.6%
Iran IR	3.5%
United Kingdom GB	2.7%
Pakistan PK	2.3%
Greece GR	1.4%
Algeria DZ	1%
Other	60.3%

Country	Rank
Algeria DZ	37114
Pakistan PK	40799
Greece GR	44892
Iran IR	59206
India IN	60775
United Kingdom GB	73267
United States US	98366

Where do visitors go on cytoscape.org?

Subdomain	Pageviews
cytoscape.org	39.14%
js.cytoscape.org	38.83%
apps.cytoscape.org	13.43%
manual.cytoscape.org	7.02%
other	1.59%

Subdomain	Pageviews per User
apps.cytoscape.org	3.1
js.cytoscape.org	2.8
manual.cytoscape.org	2.3
cytoscape.org	2.2

Subdomain	Reach
cytoscape.org	58.42%
js.cytoscape.org	44.76%
apps.cytoscape.org	14.14%
manual.cytoscape.org	9.96%

How popular is cytoscape.org?

Period	Global Rank	Global Rank Delta
past 3 months	116000	153
past month	128650	17080
past week	112844	-80209
yesterday	480516	362590

Days	Pageviews Rank	Pageviews Rank Delta	Pageviews per Million	Pageviews per Million Delta	Pageviews per User	Pageviews per User Delta
90	106534	-1409	51	4%	3.7	2%
30	127199	20075	41	-19.65%	3.3	-4.942%
7	99202	-71144	57	100%	4.1	1%
1	534773	358260	6	-79.541%	2	30%

Days	Reach Rank	Reach Rank Delta	Reach per Million	Reach per Million Delta
90	127911	512	51	2%
30	138820	17140	46	-15.3%
7	129130	-92287	51	90%
1	491743	380219	1	-84.29%

Cytoscape.org Website Safety

Overview

Last Updated: 11/10/2024

Overall result - cytoscape.org is safe.

We gather website safety and reputation data and compare it with available third-party sources so we calculate own safety and trustworthiness rate based on information that we get.

Norton Connect Safe

Last Updated: 03/22/2024

cytoscape.org is safe.

Norton ConnectSafe evaluates cytoscape.org for any unsafe and insecure content. The results are critical for families with young children.

Google Safe Search

Last Updated: 10/22/2016

cytoscape.org is safe.

SafeSearch is used as a parental control tool to filter out any inappropriate for your children search results on your devices: phones, tablets or personal computers.

Google Safe Browsing

Last Updated: 01/09/2019

cytoscape.org is safe.
Malware: not found.
Phishing: not detected.
Unwanted software: not found.
Harmfull applications: not found.

Google Safe Browsing notifies when websites are compromised by malicious actors. These protections work across Google products and provide a safer online experience.

Site Advisor

Last Updated: 02/23/2021

cytoscape.org is safe.

McAfee assesses cytoscape.org for a meaningful set of security threats. Featured dangers from annoying pop-ups to hidden Trojans, that can steal your identity, will be revealed. McAfee does not analyze cytoscape.org for mature or inappropriate content, only security checks are evaluated.

Web of Trust

Last Updated: 01/10/2019

cytoscape.org child safety is very good.

The WOT calculates reputation of the cytoscape.org. This reputation system receives ratings from users and information from third-party sources, assesses the cytoscape.org for safety features and confirms, whether cytoscape.org is suitable for children.

SSL Information

SSL Checker Tool

Domain	cytoscape.org
Issuer Organization	Let's Encrypt
Issuer	R3
Algorithm	RSA-SHA256
Valid form	12/05/2022
Expiration	03/05/2023
Signed	Certificate is not self signed
Additional Domains	cytoscape.org www.cytoscape.org

Cytoscape.org Rank History

Alexa Rank shows how popular cytoscape.org is in comparison with other sites. The most popular site has Alexa Rank equals 1. If cytoscape.org has Alexa Rank equals 100,000, then it is in TOP 100,000 popular sites in the world. The rank is calculated using a combination of average daily visitors to cytoscape.org and pageviews on cytoscape.org over the past 3 months.

Cytoscape.org Hosting Information

Server Location

Geolocation Tool

ASN Information

ASN Lookup Tool

ASN ID: 54113

ASN Title: FASTLY - Fastly, US

Last Update: 07/29/2024

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ASNumber: 54113
ASName: FASTLY
ASHandle: AS54113
RegDate: 2011-10-04
Updated: 2012-03-02
Comment: http://www.fastly.com/
Ref: https://rdap.arin.net/registry/autnum/54113

OrgName: Fastly
OrgId: SKYCA-3
Address: PO Box 78266
City: San Francisco
StateProv: CA
PostalCode: 94107
Country: US
RegDate: 2011-09-16
Updated: 2017-03-30
Ref: https://rdap.arin.net/registry/entity/SKYCA-3

OrgNOCHandle: FNO19-ARIN
OrgNOCName: Fastly Network Operations
OrgNOCPhone: +1-415-404-9374
OrgNOCEmail: noc@fastly.com
OrgNOCRef: https://rdap.arin.net/registry/entity/FNO19-ARIN

OrgTechHandle: FRA19-ARIN
OrgTechName: Fastly RIR Administrator
OrgTechPhone: +1-415-404-9374
OrgTechEmail: rir-admin@fastly.com
OrgTechRef: https://rdap.arin.net/registry/entity/FRA19-ARIN

OrgAbuseHandle: ABUSE4771-ARIN
OrgAbuseName: Abuse Account
OrgAbusePhone: +1-415-496-9353
OrgAbuseEmail: abuse@fastly.com
OrgAbuseRef: https://rdap.arin.net/registry/entity/ABUSE4771-ARIN

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#
# If you see inaccuracies in the results, please report at
# https://www.arin.net/resources/whois_reporting/index.html
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# Copyright 1997-2018, American Registry for Internet Numbers, Ltd.
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Cytoscape.org Domain Registration and Settings

WHOIS

WHOIS Lookup Tool

Domain Name: cytoscape.org
Registry Domain ID: 9957ffe62f5748c0bb1dfbbf1cbfeadd-LROR
Registrar WHOIS Server: whois.register.com
Registrar URL: http://www.register.com
Updated Date: 2022-11-04T07:18:57Z
Creation Date: 2001-11-29T21:10:06Z
Registry Expiry Date: 2025-11-29T21:10:06Z
Registrar: Register.com, Inc.
Registrar IANA ID: 9
Registrar Abuse Contact Email: domain.operations@web.com
Registrar Abuse Contact Phone: +1.8777228662
Domain Status: clientTransferProhibited https://icann.org/epp#clientTransferProhibited
Registry Registrant ID: REDACTED FOR PRIVACY
Registrant Name: REDACTED FOR PRIVACY
Registrant Organization:
Registrant Street: REDACTED FOR PRIVACY
Registrant City: REDACTED FOR PRIVACY
Registrant State/Province: redacted
Registrant Postal Code: REDACTED FOR PRIVACY
Registrant Country: FR
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Registrant Email: Please query the RDDS service of the Registrar of Record identified in this output for information on how to contact the Registrant, Admin, or Tech contact of the queried domain name.
Registry Admin ID: REDACTED FOR PRIVACY
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Admin Email: Please query the RDDS service of the Registrar of Record identified in this output for information on how to contact the Registrant, Admin, or Tech contact of the queried domain name.
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Tech Email: Please query the RDDS service of the Registrar of Record identified in this output for information on how to contact the Registrant, Admin, or Tech contact of the queried domain name.
Name Server: dns101.register.com
Name Server: dns102.register.com
DNSSEC: unsigned
URL of the ICANN Whois Inaccuracy Complaint Form: https://www.icann.org/wicf/
>>> Last update of WHOIS database: 2024-10-08T19:05:24Z

DNS Records

DNS Lookup Tool

Host	A Record	TTL

Host	MX Record	Priority	TTL

Host	NS Record	TTL

Host	TXT Record	TTL

Cytoscape.org HTML Check

HTML Validation Tool

Errors

An “img” element must have an “alt” attribute, except under certain conditions. For details, consult guidance on providing text alternatives for images.

Bad value “_new” for attribute “target” on element “a”: Reserved keyword “new” used.

Bad value “100%” for attribute “width” on element “iframe”: Expected a digit but saw “%” instead.

The “frameborder” attribute on the “iframe” element is obsolete. Use CSS instead.

No “p” element in scope but a “p” end tag seen.

Attribute “width” not allowed on element “a” at this point.

Attribute “height” not allowed on element “a” at this point.

Bad value “fancybox-button” for attribute “rel” on element “a”: The string “fancybox-button” is not a registered keyword.

End tag “h2” seen, but there were open elements.

Unclosed element “a”.

Start tag “a” seen but an element of the same type was already open.

End tag “a” violates nesting rules.

Cannot recover after last error. Any further errors will be ignored.

Cytoscape.org Desktop Performance

Last tested: 06/02/2018

Desktop Speed

68%

Leverage browser caching

Eliminate render-blocking JavaScript and CSS in above-the-fold content

Optimize images

Enable compression

Minify CSS

Minify JavaScript

Minify HTML

Desktop Resource Breakdown

Total Resources	100
Number of Hosts	22
Static Resources	79
JavaScript Resources	26
CSS Resources	14

Cytoscape.org Mobile Insights

Last tested: 01/13/2018

Mobile Usability

81%

Configure the viewport

Use legible font sizes

Size tap targets appropriately

Mobile Speed

55%

Eliminate render-blocking JavaScript and CSS in above-the-fold content

Leverage browser caching

Optimize images

Enable compression

Minify CSS

Minify JavaScript

Minify HTML

Mobile Resource Breakdown

Total Resources	100
Number of Hosts	23
Static Resources	81
JavaScript Resources	26
CSS Resources	14

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Cytoscape.org Cytoscape: An Open Source Platform for Complex Network Analysis and Visualization

Cytoscape Official Web Site

Cytoscape.org Overview

Cytoscape.org Rank Summary

Cytoscape.org Website Safety

Cytoscape.org Rank History

Cytoscape.org Hosting Information

Cytoscape.org Domain Registration and Settings

Cytoscape.org HTML Check

Cytoscape.org Desktop Performance

Cytoscape.org Mobile Insights

Cytoscape.org Similar Audits

Cytoscape.org Common Typos